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exosome complex exonuclease [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832625, updated on 18-Sep-2024

Summary

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Official Full Name
exosome complex exonuclease
Primary source
TAIR:AT5G25500
Locus tag
AT5G25500
See related
Araport:AT5G25500
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T14C9.40; T14C9_40
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (8880863..8882542)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DNA methyltransferase-2 Neighboring gene Ran BP2/NZF zinc finger-like superfamily protein Neighboring gene ncRNA Neighboring gene Protein phosphatase 2A regulatory B subunit family protein Neighboring gene ncRNA Neighboring gene SPOC domain / Transcription elongation factor S-II protein Neighboring gene DNAJ heat shock family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. AtFH1 formin mutation affects actin filament and microtubule dynamics in Arabidopsis thaliana. Rosero A, et al. J Exp Bot, 2013 Jan. PMID 23202131, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. AtFH1 mutation affects actin filament and microtubule dynamics.
    Title: AtFH1 formin mutation affects actin filament and microtubule dynamics in Arabidopsis thaliana.
Submit: New GeneRIF Correction

General gene information

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NM_122461.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
exosome complex exonuclease
NP_197932.1
  • unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    8880863..8882542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122461.2 → NP_197932.1  exosome complex exonuclease [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197932.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UDS5, Q5XV34
Nucleotide Protein
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