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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832608, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT5G25360
Locus tag
AT5G25360
See related
Araport:AT5G25360
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F18G18.100; F18G18_100
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Genomic context

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Location:
chromosome: 5
Exon count:
8
Sequence:
Chromosome: 5; NC_003076.8 (8799710..8802753, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Ubiquitin-like superfamily protein Neighboring gene ncRNA Neighboring gene EIN3-binding F box protein 2 Neighboring gene phospholipase D alpha 3 Neighboring gene cyclin a2;1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001203464.1
NM_001343919.1
NM_122445.7

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001190393.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1).
NP_197918.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    8799710..8802753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203464.1 → NP_001190393.1  uncharacterized protein AT5G25360 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190393.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UAQ5, Q84JY4
    Conserved Domains (1) summary
    pfam13259
    Location:61 → 169
    DUF4050; Protein of unknown function (DUF4050)

  2. NM_122445.7 → NP_197918.1  uncharacterized protein AT5G25360 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197918.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UAQ5, Q84JY4
    Conserved Domains (1) summary
    pfam13259
    Location:61 → 169
    DUF4050; Protein of unknown function (DUF4050)

  3. NM_001343919.1 → NP_001330286.1  uncharacterized protein AT5G25360 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BAD1
Nucleotide Protein
Heading Accession and Version

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