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Pectinacetylesterase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832452, updated on 18-Sep-2024

Summary

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Official Full Name
Pectinacetylesterase family protein
Primary source
TAIR:AT5G23870
Locus tag
AT5G23870
See related
Araport:AT5G23870
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MRO11.9; MRO11_9; PAE9; pectin acetylesterase 9
Summary
Encodes a pectin acetylesterase that removes cell wall acetate associated with pectin formation in Arabidopsis leaves.
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Genomic context

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Location:
chromosome: 5
Exon count:
14
Sequence:
Chromosome: 5; NC_003076.8 (8045540..8050395, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene O-glucosyltransferase rumi-like protein (DUF821) Neighboring gene tubulin beta 8 Neighboring gene cleavage and polyadenylation specificity factor 100 Neighboring gene GPI-anchored adhesin-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PECTIN ACETYLESTERASE9 Affects the Transcriptome and Metabolome and Delays Aphid Feeding. Kloth KJ, et al. Plant Physiol, 2019 Dec. PMID 31551361, Free PMC Article
  2. Identification and functional characterization of the distinct plant pectin esterases PAE8 and PAE9 and their deletion mutants. de Souza A, et al. Planta, 2014 Nov. PMID 25115560, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PECTIN ACETYLESTERASE9 Affects the Transcriptome and Metabolome and Delays Aphid Feeding.
    Title: PECTIN ACETYLESTERASE9 Affects the Transcriptome and Metabolome and Delays Aphid Feeding.
  2. Data show that the pae8 (At4g19420) and pae9 (At5g23870) mutants have increased pectin acetate content.
    Title: Identification and functional characterization of the distinct plant pectin esterases PAE8 and PAE9 and their deletion mutants.
Submit: New GeneRIF Correction

General gene information

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NM_001343830.1
NM_122292.4
NM_203097.2
NM_203098.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables pectin acetylesterase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables pectin acetylesterase activity IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within cell wall organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Pectinacetylesterase family protein
NP_001318631.1
  • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G62060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_974826.1
  • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G62060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
NP_974827.1
  • Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT3G62060.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    8045540..8050395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_203097.2 → NP_974826.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974826.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y784, A0A654G3M6, F4KEB8
    Conserved Domains (1) summary
    pfam03283
    Location:35 → 381
    PAE; Pectinacetylesterase

  2. NM_001343830.1 → NP_001318631.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UMX7

  3. NM_122292.4 → NP_197775.3  Pectinacetylesterase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197775.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UMX7
    Conserved Domains (1) summary
    pfam03283
    Location:35 → 381
    PAE; Pectinacetylesterase

  4. NM_203098.2 → NP_974827.1  Pectinacetylesterase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_974827.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B9DFR3, Q8W4A4, Q9FF93
    UniProtKB/TrEMBL
    A0A178UPS9
    Conserved Domains (1) summary
    pfam03283
    Location:35 → 381
    PAE; Pectinacetylesterase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
B9DFR3.1

Gene LinkOut

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