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DYAD protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832427, updated on 18-Sep-2024

Summary

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Official Full Name
DYAD protein
Primary source
TAIR:AT5G23610
Locus tag
AT5G23610
See related
Araport:AT5G23610
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MQM1.12; MQM1_12
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Genomic context

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Location:
chromosome: 5
Exon count:
8
Sequence:
Chromosome: 5; NC_003076.8 (7957249..7960446, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Transmembrane CLPTM1 family protein Neighboring gene calmodulin-like domain protein kinase 9 Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene RNA 2'-phosphotransferase, Tpt1 / KptA family Neighboring gene phosphate deficiency response 2 Neighboring gene Homeodomain-like transcriptional regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001036854.3
NM_122267.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in meiotic sister chromatid cohesion IEA
Inferred from Electronic Annotation
more info
  
involved_in reciprocal meiotic recombination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DYAD protein
NP_001031931.2
  • INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: SWITCH1 (TAIR:AT5G51330.1); Has 173 Blast hits to 168 proteins in 34 species: Archae - 3; Bacteria - 10; Metazoa - 6; Fungi - 2; Plants - 115; Viruses - 0; Other Eukaryotes - 37 (source: NCBI BLink).
NP_197751.3
  • BEST Arabidopsis thaliana protein match is: SWITCH1 (TAIR:AT5G51330.1); Has 170 Blast hits to 162 proteins in 36 species: Archae - 3; Bacteria - 6; Metazoa - 6; Fungi - 4; Plants - 117; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    7957249..7960446 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_122267.5 → NP_197751.3  DYAD protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197751.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UBZ2, A0A7G2FCJ9, F4KE83

  2. NM_001036854.3 → NP_001031931.2  DYAD protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031931.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UAF1, A0A7G2FCJ9, F4KE84
Nucleotide Protein
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