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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 832416, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT5G23510
Locus tag
AT5G23510
See related
Araport:AT5G23510
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MQM1.23; MQM1_23
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Genomic context

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Location:
chromosome: 5
Exon count:
11
Sequence:
Chromosome: 5; NC_003076.8 (7926945..7929387)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene SWIB/MDM2, Plus-3 and GYF domain-containing protein Neighboring gene uncharacterized protein Neighboring gene smr (Small MutS Related) domain-containing protein Neighboring gene carboxyesterase 18 Neighboring gene KOW domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001125794.3
NM_001343813.1
NM_122258.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001119266.2
  • unknown protein; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_197742.2
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23490.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    7926945..7929387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001125794.3 → NP_001119266.2  uncharacterized protein AT5G23510 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001119266.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y6M0, A0A654G3H2, F4KCX6

  2. NM_001343813.1 → NP_001331605.1  uncharacterized protein AT5G23510 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UD09, A0A1P8BED8

  3. NM_122258.3 → NP_197742.2  uncharacterized protein AT5G23510 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197742.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q1ECD6, Q9LT12
Nucleotide Protein
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