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NAD(P)-binding Rossmann-fold superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831939, updated on 18-Sep-2024

Summary

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Official Full Name
NAD(P)-binding Rossmann-fold superfamily protein
Primary source
TAIR:AT5G18210
Locus tag
AT5G18210
See related
Araport:AT5G18210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MRG7.17; MRG7_17
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (6017797..6018919)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene putative galactose-1-phosphate uridyltransferase Neighboring gene miscRNA Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene transcription regulator NOT2/NOT3/NOT5 family protein Neighboring gene ncRNA Neighboring gene myb-related protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001343539.1

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
NAD(P)-binding Rossmann-fold superfamily protein
NP_001318592.1
  • NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Polyketide synthase/Fatty acid synthase, KR (InterPro:IPR020842), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT3G03980.1); Has 123037 Blast hits to 122812 proteins in 3600 species: Archae - 990; Bacteria - 80816; Metazoa - 6327; Fungi - 6724; Plants - 2865; Viruses - 2; Other Eukaryotes - 25313 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    6017797..6018919
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121826.3 → NP_197322.2  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197322.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UHS9, A0A1P8BDP1
    Conserved Domains (2) summary
    PRK05557
    Location:7 → 245
    fabG; 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
    cl21454
    Location:8 → 245
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  2. NM_001343539.1 → NP_001318592.1  NAD(P)-binding Rossmann-fold superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UHS9, A0A654G2R7, F4JWJ4, Q9FK50
    Conserved Domains (1) summary
    cd05362
    Location:8 → 259
    THN_reductase-like_SDR_c; tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs
Nucleotide Protein
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