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HSP20-like chaperones superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831883, updated on 18-Sep-2024

Summary

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Official Full Name
HSP20-like chaperones superfamily protein
Primary source
TAIR:AT5G02480
Locus tag
AT5G02480
See related
Araport:AT5G02480
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T22P11.70; T22P11_70
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (547436..549996)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Transcription factor DP Neighboring gene ncRNA Neighboring gene Heat shock protein 70 (Hsp 70) family protein Neighboring gene heat shock cognate protein 70-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 547867-547965 AT5G02480.uORF1
NM_120326.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
HSP20-like chaperones superfamily protein
NP_568100.1
  • HSP20-like chaperones superfamily protein; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978); BEST Arabidopsis thaliana protein match is: HSP20-like chaperones superfamily protein (TAIR:AT2G37570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    547436..549996
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120326.3 → NP_568100.1  HSP20-like chaperones superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568100.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UFX7, A0A7G2F4I4, Q9C5N0
    Conserved Domains (1) summary
    cd06464
    Location:385 → 487
    ACD_sHsps-like; Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps). sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally ...
Nucleotide Protein
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