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acylphosphatase family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831859, updated on 18-Sep-2024

Summary

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Official Full Name
acylphosphatase family
Primary source
TAIR:AT5G03370
Locus tag
AT5G03370
See related
Araport:AT5G03370
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12E4.110; F12E4_110
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (825537..827502, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene cysteine/histidine-rich C1 domain protein Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene hypothetical protein (DUF295)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_120416.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables acylphosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast HDA PubMed 
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
acylphosphatase family
NP_195957.1
  • acylphosphatase family; FUNCTIONS IN: acylphosphatase activity; INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acylphosphatase-like (InterPro:IPR001792), Acylphosphatase, conserved site (InterPro:IPR017968), Acylphosphatase (InterPro:IPR020456); Has 2946 Blast hits to 2946 proteins in 1156 species: Archae - 171; Bacteria - 2226; Metazoa - 216; Fungi - 33; Plants - 44; Viruses - 0; Other Eukaryotes - 256 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    825537..827502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120416.5 → NP_195957.1  acylphosphatase family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195957.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UJV7, A0A654FXY8, Q0WU79, Q8LAE7, Q9LZF2
    Conserved Domains (1) summary
    cl00551
    Location:83 → 171
    Acylphosphatase
Nucleotide Protein
Heading Accession and Version

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