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SAUR21 ARM repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831850, updated on 18-Sep-2024

Summary

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Official Symbol
SAUR21
Official Full Name
ARM repeat superfamily protein
Primary source
TAIR:AT5G01830
Locus tag
AT5G01830
See related
Araport:AT5G01830
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
SMALL AUXIN UP RNA 21; T20L15.100; T20L15_100
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Genomic context

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See SAUR21 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (320349..323213)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene serine/threonine protein kinase 1 Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ovate family protein 1 Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_120261.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ubiquitin-protein transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ARM repeat superfamily protein
NP_195803.1
  • ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: plant U-box 17 (TAIR:AT1G29340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    320349..323213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120261.4 → NP_195803.1  ARM repeat superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195803.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LZW3
    UniProtKB/TrEMBL
    A0A178UNI7, A0A5S9Y0Z1
    Conserved Domains (4) summary
    smart00504
    Location:277 → 340
    Ubox; Modified RING finger domain
    PLN03200
    Location:391 → 524
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:402 → 438
    ARM; armadillo repeat [structural motif]
    cl05301
    Location:55 → 145
    MLKL_NTD; N-terminal domain of mixed lineage kinase domain-like protein (MLKL) and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LZW3.1

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