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cyclin-dependent kinase inhibitor SMR3-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831836, updated on 18-Sep-2024

Summary

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Official Full Name
cyclin-dependent kinase inhibitor SMR3-like protein
Primary source
TAIR:AT5G02420
Locus tag
AT5G02420
See related
Araport:AT5G02420
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T22P11.10; T22P11_10
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (523257..524076)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pol-like 2 Neighboring gene DIE2/ALG10 family Neighboring gene ncRNA Neighboring gene Transducin/WD40 repeat-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SIAMESE, a plant-specific cell cycle regulator, controls endoreplication onset in Arabidopsis thaliana. Churchman ML, et al. Plant Cell, 2006 Nov. PMID 17098811, Free PMC Article
  2. Targeted interactomics reveals a complex core cell cycle machinery in Arabidopsis thaliana. Van Leene J, et al. Mol Syst Biol, 2010 Aug 10. PMID 20706207, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_120320.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA endoreduplication IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
cyclin-dependent kinase inhibitor SMR3-like protein
NP_195862.1
  • unknown protein; Has 90 Blast hits to 90 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    523257..524076
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120320.3 → NP_195862.1  cyclin-dependent kinase inhibitor SMR3-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195862.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LD37, Q9LZ60
    UniProtKB/TrEMBL
    A0A178UGG1, A0A5S9Y1E5, A0A654FXQ4
    Conserved Domains (1) summary
    PLN03031
    Location:18 → 83
    PLN03031; hypothetical protein; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LZ60.1

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