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zinc/iron-chelating domain protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831827, updated on 18-Sep-2024

Summary

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Official Full Name
zinc/iron-chelating domain protein
Primary source
TAIR:AT5G02710
Locus tag
AT5G02710
See related
Araport:AT5G02710
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9G14.8
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (612463..614562)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene methionine-tRNA ligase Neighboring gene uncharacterized protein Neighboring gene F-box/RNI-like superfamily protein Neighboring gene valine-tRNA ligase Neighboring gene tRNA-Ser Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001342667.1
NM_120349.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
zinc/iron-chelating domain protein
NP_195891.1
  • unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0153 (InterPro:IPR005358); Has 240 Blast hits to 240 proteins in 73 species: Archae - 10; Bacteria - 110; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    612463..614562
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342666.1 → NP_001330041.1  zinc/iron-chelating domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UEN5, A0A5S9Y133, Q9LZ14

  2. NM_120349.4 → NP_195891.1  zinc/iron-chelating domain protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195891.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UEN5, A0A5S9Y133, Q9LZ14
    Conserved Domains (1) summary
    pfam03692
    Location:62 → 147
    CxxCxxCC; Putative zinc- or iron-chelating domain

  3. NM_001342667.1 → NP_001330042.1  zinc/iron-chelating domain protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UEN5, A0A5S9Y133, Q9LZ14
Nucleotide Protein
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