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valine-tRNA ligase [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831821, updated on 18-Sep-2024

Summary

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Official Full Name
valine-tRNA ligase
Primary source
TAIR:AT5G02720
Locus tag
AT5G02720
See related
Araport:AT5G02720
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F9G14.30; F9G14_30
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (613482..615091, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene methionine-tRNA ligase Neighboring gene uncharacterized protein Neighboring gene F-box/RNI-like superfamily protein Neighboring gene zinc/iron-chelating domain protein Neighboring gene tRNA-Ser Neighboring gene CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein Neighboring gene Ribosomal protein S24e family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001342668.1
NM_001342669.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
valine-tRNA ligase
NP_001318460.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G53490.1); Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    613482..615091 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342668.1 → NP_001318460.1  valine-tRNA ligase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4KDS4, Q9LZ13

  2. NM_001342669.1 → NP_001331476.1  valine-tRNA ligase [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BDZ7, A0A5S9Y1G6
Nucleotide Protein
Heading Accession and Version

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