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F-box/RNI-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831808, updated on 18-Sep-2024

Summary

Official Full Name
F-box/RNI-like superfamily protein
Primary source
TAIR:AT5G03100
Locus tag
AT5G03100
See related
Araport:AT5G03100
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F15A17.130; F15A17_130
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Genomic context

Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (726779..728855)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Phosphatidic acid phosphatase (PAP2) family protein Neighboring gene Mto 1 responding down protein Neighboring gene protamine P1 family protein Neighboring gene uncharacterized protein

General gene information

NM_001342686.1
NM_120388.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in peroxisome PubMed 

General protein information

Preferred Names
F-box/RNI-like superfamily protein
NP_195930.2
  • F-box/RNI-like superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT3G28410.1); Has 2060 Blast hits to 2032 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 0; Plants - 2053; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    726779..728855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120388.4 → NP_195930.2  F-box/RNI-like superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195930.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q501G5, Q9FYN2, Q9LYX5
    UniProtKB/TrEMBL
    A0A178UKA4
    Conserved Domains (2) summary
    sd00032
    Location:130 → 148
    LRR_2; leucine-rich repeat [structural motif]
    pfam00646
    Location:9 → 45
    F-box; F-box domain
  2. NM_001342686.1 → NP_001331434.1  F-box/RNI-like superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q501G5, Q9FYN2, Q9LYX5
    UniProtKB/TrEMBL
    A0A178UKA4
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