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Fes1C Fes1C [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831805, updated on 18-Sep-2024

Summary

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Official Symbol
Fes1C
Official Full Name
Fes1C
Primary source
TAIR:AT5G02150
Locus tag
AT5G02150
See related
Araport:AT5G02150
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T7H20.200; T7H20_200
Summary
Encodes one of the Arabidopsis orthologs of the human Hsp70-binding protein 1 (HspBP-1) and yeast Fes1p: Fes1A (AT3G09350), Fes1B (AT3G53800), Fes1C (AT5G02150).
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Genomic context

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See Fes1C in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (424291..426378, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene one helix protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Pathogenesis-related thaumatin superfamily protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene Transmembrane amino acid transporter family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001036745.2
NM_001342648.1
NM_120293.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Fes1C
NP_001031822.1
  • Fes1C (Fes1C); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1A (TAIR:AT3G09350.3); Has 563 Blast hits to 561 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 185; Fungi - 152; Plants - 168; Viruses - 0; Other Eukaryotes - 58 (source: NCBI BLink).
NP_195835.1
  • Fes1C (Fes1C); FUNCTIONS IN: binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Fes1A (TAIR:AT3G09350.1); Has 582 Blast hits to 579 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 194; Fungi - 149; Plants - 170; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    424291..426378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120293.3 → NP_195835.1  Fes1C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195835.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y2V2, Q9LZL7
    Conserved Domains (3) summary
    cd00020
    Location:99 → 208
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam08609
    Location:9 → 95
    Fes1; Nucleotide exchange factor Fes1
    sd00043
    Location:94 → 126
    ARM; armadillo repeat [structural motif]

  2. NM_001036745.2 → NP_001031822.1  Fes1C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001031822.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y2V2, F4KAZ8
    Conserved Domains (3) summary
    cd00020
    Location:60 → 169
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam08609
    Location:4 → 56
    Fes1; Nucleotide exchange factor Fes1
    sd00043
    Location:55 → 87
    ARM; armadillo repeat [structural motif]

  3. NM_001342648.1 → NP_001332564.1  Fes1C [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y2V2, Q9LZL7
Nucleotide Protein
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