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MIF4G domain-containing protein / MA3 domain-containing protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831661, updated on 18-Sep-2024

Summary

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Official Full Name
MIF4G domain-containing protein / MA3 domain-containing protein
Primary source
TAIR:AT5G17930
Locus tag
AT5G17930
See related
Araport:AT5G17930
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MCM23.1; MCM23_1
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Genomic context

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Location:
chromosome: 5
Exon count:
13
Sequence:
Chromosome: 5; NC_003076.8 (5939994..5944481, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene cardiomyopathy-associated protein Neighboring gene Cobalamin-independent synthase family protein Neighboring gene disease resistance protein Neighboring gene Cysteine/Histidine-rich C1 domain family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_121799.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
MIF4G domain-containing protein / MA3 domain-containing protein
NP_197295.2
  • MIF4G domain-containing protein / MA3 domain-containing protein; FUNCTIONS IN: binding; INVOLVED IN: RNA metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891), Armadillo-type fold (InterPro:IPR016024), MIF4G-like, type 3 (InterPro:IPR003890); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT1G80930.1); Has 15897 Blast hits to 11268 proteins in 674 species: Archae - 101; Bacteria - 729; Metazoa - 6896; Fungi - 1567; Plants - 651; Viruses - 76; Other Eukaryotes - 5877 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5939994..5944481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121799.4 → NP_197295.2  MIF4G domain-containing protein / MA3 domain-containing protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197295.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654G2P0, Q67Z79
    Conserved Domains (2) summary
    smart00543
    Location:304 → 499
    MIF4G; Middle domain of eukaryotic initiation factor 4G (eIF4G)
    cl02653
    Location:587 → 688
    MA3; MA3 domain
Nucleotide Protein
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