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glutamyl-tRNA (Gln) amidotransferase subunit C [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831612, updated on 18-Sep-2024

Summary

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Official Full Name
glutamyl-tRNA (Gln) amidotransferase subunit C
Primary source
TAIR:AT5G17460
Locus tag
AT5G17460
See related
Araport:AT5G17460
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (5757073..5759817, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene LUC7 related protein Neighboring gene ncRNA Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene EF hand calcium-binding protein family Neighboring gene pollen calcium-binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. DFR1-Mediated Inhibition of Proline Degradation Pathway Regulates Drought and Freezing Tolerance in Arabidopsis. Ren Y, et al. Cell Rep, 2018 Jun 26. PMID 29949777
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001343500.1
NM_001343501.1
NM_001343502.1
NM_001343503.1
NM_121752.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within regulation of proline metabolic process IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
colocalizes_with mitochondrion IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
glutamyl-tRNA (Gln) amidotransferase subunit C
NP_001318584.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress.
NP_568348.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5757073..5759817 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121752.4 → NP_568348.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568348.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UFD6, A0A384KQ82, F4KH06, Q949X1

  2. NM_001343500.1 → NP_001318584.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UFD6, A0A384KQ82, F4KH06, Q949X1

  3. NM_001343501.1 → NP_001331090.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BCT0

  4. NM_001343503.1 → NP_001331089.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UFD6, A0A384KQ82, F4KH06, Q949X1

  5. NM_001343502.1 → NP_001331088.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UFD6, A0A384KQ82, F4KH06, Q949X1
Nucleotide Protein
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