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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831601, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT5G17350
Locus tag
AT5G17350
See related
Araport:AT5G17350
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MKP11.31; MKP11_31
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (5718498..5719608)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene glutamate decarboxylase Neighboring gene Putative membrane lipoprotein Neighboring gene uncharacterized protein Neighboring gene DNA ligase Neighboring gene ncRNA Neighboring gene Transducin/WD40 repeat-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Patterns of Sequence and Expression Diversification Associate Members of the PADRE Gene Family With Response to Fungal Pathogens. Didelon M, et al. Front Genet, 2020. PMID 32547597, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_121741.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to fungus IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_197237.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5718498..5719608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121741.2 → NP_197237.1  uncharacterized protein AT5G17350 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197237.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UK61, A0A654G297, Q9LF49
    Conserved Domains (1) summary
    pfam14009
    Location:1 → 179
    DUF4228; Domain of unknown function (DUF4228)
Nucleotide Protein
Heading Accession and Version

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