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SP1L4 SPIRAL1-like4 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831412, updated on 18-Sep-2024

Summary

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Official Symbol
SP1L4
Official Full Name
SPIRAL1-like4
Primary source
TAIR:AT5G15600
Locus tag
AT5G15600
See related
Araport:AT5G15600
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
SPIRAL1-like4; T20K14.210; T20K14_210
Summary
SPIRAL1-LIKE4 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion.
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Genomic context

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See SP1L4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (5078200..5079327)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Bromodomain transcription factor Neighboring gene longifolia1 Neighboring gene uncharacterized protein Neighboring gene Proteasome component (PCI) domain protein Neighboring gene F-box/RNI-like superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. SPIRAL1 encodes a plant-specific microtubule-localized protein required for directional control of rapidly expanding Arabidopsis cells. Nakajima K, et al. Plant Cell, 2004 May. PMID 15084720, Free PMC Article
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001343410.1
NM_121564.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in cortical microtubule organization IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
SPIRAL1-like4
NP_197064.1
  • SPIRAL1-like4 (SP1L4); BEST Arabidopsis thaliana protein match is: SPIRAL1-like3 (TAIR:AT3G02180.2); Has 230 Blast hits to 203 proteins in 47 species: Archae - 0; Bacteria - 6; Metazoa - 11; Fungi - 4; Plants - 139; Viruses - 2; Other Eukaryotes - 68 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    5078200..5079327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121564.3 → NP_197064.1  SPIRAL1-like4 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197064.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LBJ3, Q9LF22
    UniProtKB/TrEMBL
    A0A178U7W0, A0A5S9Y4E1

  2. NM_001343410.1 → NP_001330276.1  SPIRAL1-like4 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LBJ3, Q9LF22
    UniProtKB/TrEMBL
    A0A178U7W0, A0A5S9Y4E1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LF22.1

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