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WPP domain associated protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831351, updated on 18-Sep-2024

Summary

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Official Full Name
WPP domain associated protein
Primary source
TAIR:AT5G14990
Locus tag
AT5G14990
See related
Araport:AT5G14990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F2G14.110; F2G14_110
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Genomic context

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Location:
chromosome: 5
Exon count:
5
Sequence:
Chromosome: 5; NC_003076.8 (4850668..4853087)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene seed maturation-like protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ECA1 gametogenesis related family protein Neighboring gene ECA1 gametogenesis family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001203381.1
NM_121503.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
WPP domain associated protein
NP_001190310.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower; EXPRESSED DURING: 4 anthesis.
NP_197003.1
  • BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT2G34730.1); Has 8284 Blast hits to 6001 proteins in 578 species: Archae - 107; Bacteria - 678; Metazoa - 3983; Fungi - 607; Plants - 315; Viruses - 16; Other Eukaryotes - 2578 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4850668..4853087
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001203381.1 → NP_001190310.1  WPP domain associated protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190310.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y4K6, A0A654G169, F4K8A5

  2. NM_121503.1 → NP_197003.1  WPP domain associated protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_197003.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y4K6, A0A654G169, Q9LFQ6
Nucleotide Protein
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