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NRT2.7 high affinity nitrate transporter 2.7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831308, updated on 18-Sep-2024

Summary

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Official Symbol
NRT2.7
Official Full Name
high affinity nitrate transporter 2.7
Primary source
TAIR:AT5G14570
Locus tag
AT5G14570
See related
Araport:AT5G14570
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATNRT2.7; high affinity nitrate transporter 2.7; T15N1.60; T15N1_60
Summary
Encodes ATNRT2.7, a nitrate transporter that controls nitrate content in seeds. Expression is detected in reproductive organs and peaks in seeds. Localized to the vacuolar membrane.
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Genomic context

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See NRT2.7 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (4695084..4697078, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene polyribonucleotide nucleotidyltransferase Neighboring gene Isocitrate/isopropylmalate dehydrogenase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7. David LC, et al. J Exp Bot, 2014 Mar. PMID 24532452, Free PMC Article
  2. The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds. Chopin F, et al. Plant Cell, 2007 May. PMID 17540716, Free PMC Article
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The results highlight a hitherto-unknown function of NRT2.7 in proantocyanidins (PAs) accumulation/oxidation.
    Title: Proanthocyanidin oxidation of Arabidopsis seeds is altered in mutant of the high-affinity nitrate transporter NRT2.7.
  2. These results demonstrate that ATNRT2.7 plays a specific role in nitrate accumulation in the seed.
    Title: The Arabidopsis ATNRT2.7 nitrate transporter controls nitrate content in seeds.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_121461.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables nitrate transmembrane transporter activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables nitrate transmembrane transporter activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within nitrate transmembrane transport IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plant-type vacuole membrane IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
high affinity nitrate transporter 2.7
NP_196961.1
  • high affinity nitrate transporter 2.7 (NRT2.7); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter2.5 (TAIR:AT1G12940.1); Has 7777 Blast hits to 7739 proteins in 1625 species: Archae - 132; Bacteria - 6743; Metazoa - 43; Fungi - 326; Plants - 261; Viruses - 0; Other Eukaryotes - 272 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4695084..4697078 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121461.3 → NP_196961.1  high affinity nitrate transporter 2.7 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LYK2
    UniProtKB/TrEMBL
    A0A178UKX9, A0A178UMM2, A0A5S9Y447
    Conserved Domains (1) summary
    PLN00028
    Location:5 → 493
    PLN00028; nitrate transmembrane transporter; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LYK2.1

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