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Leucine-rich repeat protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831271, updated on 18-Sep-2024

Summary

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Official Full Name
Leucine-rich repeat protein kinase family protein
Primary source
TAIR:AT5G14210
Locus tag
AT5G14210
See related
Araport:AT5G14210
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MUA22.21; MUA22_21
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Sequence:
Chromosome: 5; NC_003076.8 (4578378..4582856, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene SWIB/MDM2 domain superfamily protein Neighboring gene Myzus persicae-induced lipase 1 Neighboring gene isopropylmalate dehydrogenase 1 Neighboring gene Flavin containing amine oxidoreductase family Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. Heazlewood JL, et al. Plant Cell, 2004 Jan. PMID 14671022, Free PMC Article
  2. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_001343322.1
NM_001343323.1
NM_121425.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Leucine-rich repeat protein kinase family protein
NP_196925.2
  • Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G03770.2); Has 111153 Blast hits to 61478 proteins in 2137 species: Archae - 27; Bacteria - 5463; Metazoa - 27639; Fungi - 2569; Plants - 67603; Viruses - 117; Other Eukaryotes - 7735 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4578378..4582856 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121425.4 → NP_196925.2  Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196925.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y3Z4, A0A654G137, C0LGT2
    Conserved Domains (4) summary
    PLN03150
    Location:32 → 185
    PLN03150; hypothetical protein; Provisional
    PLN00113
    Location:116 → 764
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:143 → 163
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:496 → 752
    PKc_like; Protein Kinases, catalytic domain

  2. NM_001343322.1 → NP_001330239.1  Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178US29, A0A1P8BA66, A0A384KDD9, A0A5S9Y3Z4
    Conserved Domains (4) summary
    PLN03150
    Location:32 → 185
    PLN03150; hypothetical protein; Provisional
    PLN00113
    Location:116 → 795
    PLN00113; leucine-rich repeat receptor-like protein kinase; Provisional
    sd00033
    Location:143 → 163
    LRR_RI; leucine-rich repeat [structural motif]
    cl21453
    Location:496 → 783
    PKc_like; Protein Kinases, catalytic domain

  3. NM_001343323.1 → NP_001330240.1  Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8BA72, A0A5S9Y3Z4
Nucleotide Protein
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