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Pollen Ole e 1 allergen and extensin family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831153, updated on 18-Sep-2024

Summary

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Official Full Name
Pollen Ole e 1 allergen and extensin family protein
Primary source
TAIR:AT5G13140
Locus tag
AT5G13140
See related
Araport:AT5G13140
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T19L5.100; T19L5_100
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (4170560..4171954, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene glucose-6-phosphate dehydrogenase 2 Neighboring gene cyclophilin 20-2 Neighboring gene Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein Neighboring gene ncRNA Neighboring gene exocyst subunit exo70 family protein C1 Neighboring gene Protein kinase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_121317.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Pollen Ole e 1 allergen and extensin family protein
NP_196818.1
  • Pollen Ole e 1 allergen and extensin family protein; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: Pollen Ole e 1 allergen and extensin family protein (TAIR:AT3G26960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    4170560..4171954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121317.3 → NP_196818.1  Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196818.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y3N6, Q8LEU2, Q9FY96
    Conserved Domains (1) summary
    pfam01190
    Location:41 → 138
    Pollen_Ole_e_I; Pollen proteins Ole e I like
Nucleotide Protein
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