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Ubiquitin-associated/translation elongation factor EF1B protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 831085, updated on 18-Sep-2024

Summary

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Official Full Name
Ubiquitin-associated/translation elongation factor EF1B protein
Primary source
TAIR:AT5G12120
Locus tag
AT5G12120
See related
Araport:AT5G12120
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MXC9.8; MXC9_8
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (3915676..3918933, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Protein kinase superfamily protein Neighboring gene pentatricopeptide (PPR) repeat-containing protein Neighboring gene elongation factor 1-beta 1 Neighboring gene integral membrane TerC family protein Neighboring gene cystatin-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_121250.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ubiquitin-associated/translation elongation factor EF1B protein
NP_196773.1
  • Ubiquitin-associated/translation elongation factor EF1B protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940); BEST Arabidopsis thaliana protein match is: Ubiquitin-associated/translation elongation factor EF1B protein (TAIR:AT2G26920.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3915676..3918933 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121250.3 → NP_196773.1  Ubiquitin-associated/translation elongation factor EF1B protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196773.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U7T2, A0A5S9Y3H3, Q9FMQ0
    Conserved Domains (1) summary
    cl21463
    Location:159 → 190
    UBA_like_SF; UBA domain-like superfamily
Nucleotide Protein
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