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CM2 chorismate mutase 2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830954, updated on 18-Sep-2024

Summary

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Official Symbol
CM2
Official Full Name
chorismate mutase 2
Primary source
TAIR:AT5G10870
Locus tag
AT5G10870
See related
Araport:AT5G10870
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATCM2; chorismate mutase 2
Summary
Encodes chorismate mutase AtCM2.
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Genomic context

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See CM2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (3430497..3432468, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene Cystathionine beta-synthase (CBS) family protein Neighboring gene tRNA synthetase-related / tRNA ligase-like protein Neighboring gene myosin heavy chain-like protein Neighboring gene Calcineurin-like metallo-phosphoesterase superfamily protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cytosolic and plastidic chorismate mutase isozymes from Arabidopsis thaliana: molecular characterization and enzymatic properties. Eberhard J, et al. Plant J, 1996 Nov. PMID 8953244
  2. Structural evolution of differential amino acid effector regulation in plant chorismate mutases. Westfall CS, et al. J Biol Chem, 2014 Oct 10. PMID 25160622, Free PMC Article
  3. Identification, characterization and comparative analysis of a novel chorismate mutase gene in Arabidopsis thaliana. Mobley EM, et al. Gene, 1999 Nov 15. PMID 10564818
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Structural evolution of differential amino acid effector regulation was found in 3 chorismate mutase isoforms.
    Title: Structural evolution of differential amino acid effector regulation in plant chorismate mutases.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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NM_121125.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables chorismate mutase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables chorismate mutase activity IGI
Inferred from Genetic Interaction
more info
 PubMed 
enables protein homodimerization activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
involved_in aromatic amino acid family biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
acts_upstream_of_or_within aromatic amino acid family biosynthetic process TAS
Traceable Author Statement
more info
 PubMed 
involved_in chorismate metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in prephenate(2-) biosynthetic process IDA
Inferred from Direct Assay
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
located_in cytosol ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
chorismate mutase 2
NP_196648.1
  • chorismate mutase 2 (CM2); CONTAINS InterPro DOMAIN/s: Chorismate mutase, type II (InterPro:IPR020822), Chorismate mutase, AroQ class, eukaryotic type (InterPro:IPR008238); BEST Arabidopsis thaliana protein match is: chorismate mutase 3 (TAIR:AT1G69370.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3430497..3432468 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121125.3 → NP_196648.1  chorismate mutase 2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196648.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9S7H4
    UniProtKB/TrEMBL
    A0A178UB55, A0A5S9Y344
    Conserved Domains (1) summary
    PLN02344
    Location:1 → 265
    PLN02344; chorismate mutase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9S7H4.1

Gene LinkOut

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