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HK5 histidine kinase 5 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830938, updated on 18-Sep-2024

Summary

Official Symbol
HK5
Official Full Name
histidine kinase 5
Primary source
TAIR:AT5G10720
Locus tag
AT5G10720
See related
Araport:AT5G10720
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AHK5; CKI2; CYTOKININ INDEPENDENT 2; histidine kinase 5; MAJ23.80; MAJ23_80
Summary
member of Histidine Kinase
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Genomic context

See HK5 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
13
Sequence:
Chromosome: 5; NC_003076.8 (3385901..3390686)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene centromere protein O Neighboring gene ncRNA Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene Protein phosphatase 2C family protein Neighboring gene uncharacterized protein Neighboring gene enhanced disease resistance-like protein (DUF1336)

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_121110.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables phosphorelay sensor kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein histidine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein histidine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
 
located_in plant-type vacuole HDA PubMed 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
histidine kinase 5
NP_196633.2
  • histidine kinase 5 (HK5); FUNCTIONS IN: protein histidine kinase activity; INVOLVED IN: cytokinin mediated signaling pathway; LOCATED IN: vacuole; EXPRESSED IN: male gametophyte, root; CONTAINS InterPro DOMAIN/s: Signal transduction histidine kinase, homodimeric (InterPro:IPR009082), CheY-like (InterPro:IPR011006), Signal transduction histidine kinase, core (InterPro:IPR005467), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain (InterPro:IPR003661), ATPase-like, ATP-binding domain (InterPro:IPR003594), Signal transduction histidine kinase-related protein, C-terminal (InterPro:IPR004358); BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10680.1); Has 142896 Blast hits to 126384 proteins in 3154 species: Archae - 1152; Bacteria - 126386; Metazoa - 257; Fungi - 2334; Plants - 2049; Viruses - 33; Other Eukaryotes - 10685 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3385901..3390686
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121110.2NP_196633.2  histidine kinase 5 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196633.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q3S4A7, Q9FT60
    UniProtKB/TrEMBL
    A0A178ULC2, A0A5S9Y3R1, A0A654G0J4
    Conserved Domains (1) summary
    PRK11107
    Location:371922
    PRK11107; hybrid sensory histidine kinase BarA; Provisional