U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

centromere protein O [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830936, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Full Name
centromere protein O
Primary source
TAIR:AT5G10710
Locus tag
AT5G10710
See related
Araport:AT5G10710
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MAJ23.70; MAJ23_70
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 5
Exon count:
13
Sequence:
Chromosome: 5; NC_003076.8 (3378956..3382958)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene calmodulin-binding protein-like protein Neighboring gene pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein Neighboring gene methionyl-tRNA synthetase Neighboring gene ncRNA Neighboring gene Peptidyl-tRNA hydrolase II (PTH2) family protein Neighboring gene ncRNA Neighboring gene histidine kinase 5 Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Extensive signal integration by the phytohormone protein network. Altmann M, et al. Nature, 2020 Jul. PMID 32612234
  2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
  3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help
NM_001203356.1
NM_121109.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in centromere complex assembly IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in kinetochore IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

Go to the top of the page Help
Preferred Names
centromere protein O
NP_001190285.1
  • INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464).
NP_001318533.1
  • INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
NP_568235.1
  • INVOLVED IN: chromosome segregation, cell division; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Centromere protein Cenp-O (InterPro:IPR018464); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3378956..3382958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001343133.1 → NP_001318533.1  centromere protein O [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4KI95
    Conserved Domains (1) summary
    pfam09496
    Location:106 → 229
    CENP-O; Cenp-O kinetochore centromere component

  2. NM_121109.3 → NP_568235.1  centromere protein O [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568235.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A7G2FDR2, Q8GUP4, Q9C5F7
    Conserved Domains (1) summary
    pfam09496
    Location:106 → 306
    CENP-O; Cenp-O kinetochore centromere component

  3. NM_001203356.1 → NP_001190285.1  centromere protein O [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190285.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    F4KI97, Q9C5F7
    Conserved Domains (1) summary
    pfam09496
    Location:92 → 292
    CENP-O; Cenp-O kinetochore centromere component
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.