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Concanavalin A-like lectin protein kinase family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830918, updated on 18-Sep-2024

Summary

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Official Full Name
Concanavalin A-like lectin protein kinase family protein
Primary source
TAIR:AT5G10530
Locus tag
AT5G10530
See related
Araport:AT5G10530
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12B17.120; F12B17_120; L-type lectin receptor kinase IX.1; LecRK-IX.1
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Genomic context

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Location:
chromosome: 5
Exon count:
1
Sequence:
Chromosome: 5; NC_003076.8 (3324824..3327868, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene AINTEGUMENTA-like 6 Neighboring gene ROP binding protein kinases 1 Neighboring gene tRNA-Arg Neighboring gene Zincin-like metalloproteases family protein Neighboring gene ncRNA Neighboring gene global transcription factor group E2 Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Arabidopsis Lectin Receptor Kinases LecRK-IX.1 and LecRK-IX.2 Are Functional Analogs in Regulating Phytophthora Resistance and Plant Cell Death. Wang Y, et al. Mol Plant Microbe Interact, 2015 Sep. PMID 26011556
  2. Phenotypic analyses of Arabidopsis T-DNA insertion lines and expression profiling reveal that multiple L-type lectin receptor kinases are involved in plant immunity. Wang Y, et al. Mol Plant Microbe Interact, 2014 Dec. PMID 25083911
  3. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Both LecRK-IX.1 and LecRK-IX.2 interact with the same ABC transporter, suggesting that they exploit similar signal transduction pathways.
    Title: Arabidopsis Lectin Receptor Kinases LecRK-IX.1 and LecRK-IX.2 Are Functional Analogs in Regulating Phytophthora Resistance and Plant Cell Death.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_121091.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in defense response to oomycetes IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in plant-type hypersensitive response IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
  

General protein information

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Preferred Names
Concanavalin A-like lectin protein kinase family protein
NP_196615.1
  • Concanavalin A-like lectin protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT5G65600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3324824..3327868 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121091.2 → NP_196615.1  Concanavalin A-like lectin protein kinase family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196615.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9LXA5
    UniProtKB/TrEMBL
    A0A178UGN9, A0A5S9Y312, A0A654FZZ1
    Conserved Domains (2) summary
    cd14066
    Location:341 → 608
    STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    pfam00139
    Location:19 → 253
    Lectin_legB; Legume lectin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9LXA5.1

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