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RBK1 ROP binding protein kinases 1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830917, updated on 18-Sep-2024

Summary

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Official Symbol
RBK1
Official Full Name
ROP binding protein kinases 1
Primary source
TAIR:AT5G10520
Locus tag
AT5G10520
See related
Araport:AT5G10520
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F12B17.130; F12B17_130; ROP binding protein kinases 1
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Genomic context

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See RBK1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Sequence:
Chromosome: 5; NC_003076.8 (3319870..3322935, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Kinase interacting (KIP1-like) family protein Neighboring gene ncRNA Neighboring gene AINTEGUMENTA-like 6 Neighboring gene tRNA-Arg Neighboring gene Zincin-like metalloproteases family protein Neighboring gene Concanavalin A-like lectin protein kinase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An Arabidopsis kinase cascade influences auxin-responsive cell expansion. Enders TA, et al. Plant J, 2017 Oct. PMID 28710770, Free PMC Article
  2. A cysteine-rich receptor-like kinase NCRK and a pathogen-induced protein kinase RBK1 are Rop GTPase interactors. Molendijk AJ, et al. Plant J, 2008 Mar. PMID 18088316
  3. Differential binding of calmodulin-related proteins to their targets revealed through high-density Arabidopsis protein microarrays. Popescu SC, et al. Proc Natl Acad Sci U S A, 2007 Mar 13. PMID 17360592, Free PMC Article
  4. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001343120.1
NM_121090.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables GTPase binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables kinase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in cellular response to ethylene stimulus IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in defense response to fungus IEP
Inferred from Expression Pattern
more info
 PubMed 
acts_upstream_of_or_within defense response to other organism IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in endomembrane system IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
ROP binding protein kinases 1
NP_568231.1
  • ROP binding protein kinases 1 (RBK1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: defense response, incompatible interaction; LOCATED IN: cytosol, endomembrane system; EXPRESSED IN: 6 plant structures; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G65530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3319870..3322935 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121090.4 → NP_568231.1  ROP binding protein kinases 1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568231.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8H1D6, Q93ZZ8, Q9LXA4
    UniProtKB/TrEMBL
    A0A178UTT7, A0A5S9Y308, A0A7G2F6X5
    Conserved Domains (1) summary
    cl21453
    Location:159 → 421
    PKc_like; Protein Kinases, catalytic domain

  2. NM_001343120.1 → NP_001332648.1  ROP binding protein kinases 1 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1R7T399
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8H1D6.1

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