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PROPEP4 elicitor peptide 4 precursor [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830859, updated on 18-Sep-2024

Summary

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Official Symbol
PROPEP4
Official Full Name
elicitor peptide 4 precursor
Primary source
TAIR:AT5G09980
Locus tag
AT5G09980
See related
Araport:AT5G09980
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
elicitor peptide 4 precursor; MYH9.20; MYH9_20
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Genomic context

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See PROPEP4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (3122731..3124003)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene elicitor peptide 7 precursor Neighboring gene elicitor peptide 5 precursor Neighboring gene uncharacterized protein Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An endogenous peptide signal in Arabidopsis activates components of the innate immune response. Huffaker A, et al. Proc Natl Acad Sci U S A, 2006 Jun 27. PMID 16785434, Free PMC Article
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_121035.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within response to jasmonic acid IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
elicitor peptide 4 precursor
NP_568223.1
  • elicitor peptide 4 precursor (PROPEP4); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to jasmonic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    3122731..3124003
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_121035.4 → NP_568223.1  elicitor peptide 4 precursor [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568223.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L9J1, Q9FIA9
    UniProtKB/TrEMBL
    A0A178UAH4, A0A5S9Y362
    Conserved Domains (1) summary
    pfam17232
    Location:2 → 73
    DUF5306; Family of unknown function (DUF5306)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FIA9.1

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