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loricrin-like protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830826, updated on 18-Sep-2024

Summary

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Official Full Name
loricrin-like protein
Primary source
TAIR:AT5G09670
Locus tag
AT5G09670
See related
Araport:AT5G09670
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F17I14.140; F17I14_140
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (2995912..2998932, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene peroxisomal NAD-malate dehydrogenase 2 Neighboring gene reduced lateral root formation Neighboring gene magnesium transporter 7 Neighboring gene Glycosyl hydrolase family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c2997942-2997844 AT5G09670.uORF1
NM_121004.2
NM_180470.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
loricrin-like protein
NP_196529.1
  • loricrin-related; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3115 Blast hits to 1776 proteins in 152 species: Archae - 0; Bacteria - 24; Metazoa - 1222; Fungi - 31; Plants - 508; Viruses - 3; Other Eukaryotes - 1327 (source: NCBI BLink).
NP_850801.1
  • loricrin-related; BEST Arabidopsis thaliana protein match is: loricrin-related (TAIR:AT5G64550.1); Has 3115 Blast hits to 1776 proteins in 152 species: Archae - 0; Bacteria - 24; Metazoa - 1222; Fungi - 31; Plants - 508; Viruses - 3; Other Eukaryotes - 1327 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2995912..2998932 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_180470.2 → NP_850801.1  loricrin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_850801.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UIX6, A0A5S9Y2S2, Q9LXD0

  2. NM_121004.2 → NP_196529.1  loricrin-like protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196529.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UIX6, A0A5S9Y2S2, Q9LXD0
Nucleotide Protein
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