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uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830672, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
TAIR:AT5G07790
Locus tag
AT5G07790
See related
Araport:AT5G07790
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MXM12.3; MXM12_3
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (2483123..2486531)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Actin-binding FH2 protein Neighboring gene Actin-binding FH2 (formin homology 2) family protein Neighboring gene Flavin-binding monooxygenase family protein Neighboring gene SNF2 domain-containing protein / helicase domain-containing protein / HNH endonuclease domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_001203323.2
NM_001342962.1
NM_120861.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_001190252.1
  • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61300.1).
NP_196396.1
  • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G61300.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2483123..2486531
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120861.4 → NP_196396.1  uncharacterized protein AT5G07790 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196396.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8VXX2, Q9FF13
    Conserved Domains (1) summary
    pfam05904
    Location:435 → 603
    DUF863; Plant protein of unknown function (DUF863)

  2. NM_001203323.2 → NP_001190252.1  uncharacterized protein AT5G07790 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001190252.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8VXX2, Q9FF13
    Conserved Domains (1) summary
    pfam05904
    Location:435 → 603
    DUF863; Plant protein of unknown function (DUF863)

  3. NM_001342962.1 → NP_001332443.1  uncharacterized protein AT5G07790 [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8VXX2, Q9FF13
Nucleotide Protein
Heading Accession and Version

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