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plant/protein (DUF810) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830588, updated on 18-Sep-2024

Summary

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Official Full Name
plant/protein (DUF810)
Primary source
TAIR:AT5G06970
Locus tag
AT5G06970
See related
Araport:AT5G06970
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MOJ9.14; MOJ9_14
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Genomic context

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Location:
chromosome: 5
Exon count:
27
Sequence:
Chromosome: 5; NC_003076.8 (2157970..2166511, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene bZIP transcription factor family protein Neighboring gene OCS-element binding factor 5 Neighboring gene uncharacterized protein Neighboring gene MIZU-KUSSEI-like protein (Protein of unknown function, DUF617) Neighboring gene sulfotransferase 2B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Dynamics and environmental responses of PATROL1 in Arabidopsis subsidiary cells. Higaki T, et al. Plant Cell Physiol, 2014 Apr. PMID 24163289
  2. A Munc13-like protein in Arabidopsis mediates H+-ATPase translocation that is essential for stomatal responses. Hashimoto-Sugimoto M, et al. Nat Commun, 2013. PMID 23896897, Free PMC Article
  3. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609
  4. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
  5. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PATROL1 may contribute to stomatal movement by translocations of plasma membrane H(+)-ATPase in subsidiary cells.
    Title: Dynamics and environmental responses of PATROL1 in Arabidopsis subsidiary cells.
  2. A Munc13-like protein in Arabidopsis (PATROL1) mediates AHA1 translocation that is essential for stomatal responses. [PATROL1]
    Title: A Munc13-like protein in Arabidopsis mediates H+-ATPase translocation that is essential for stomatal responses.
Submit: New GeneRIF Correction

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_120779.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein localization to plasma membrane IMP
Inferred from Mutant Phenotype
more info
 PubMed 
acts_upstream_of_or_within stomatal movement IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasmodesma HDA PubMed 

General protein information

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Preferred Names
plant/protein (DUF810)
NP_196314.2
  • CONTAINS InterPro DOMAIN/s: Munc13 homology 1 (InterPro:IPR014770), Protein of unknown function DUF810 (InterPro:IPR008528), Mammalian uncoordinated homology 13, domain 2 (InterPro:IPR014772); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF810) (TAIR:AT4G11670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    2157970..2166511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120779.3 → NP_196314.2  plant/protein (DUF810) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196314.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8RX56, Q9FL49
    UniProtKB/TrEMBL
    A0A178UQH9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8RX56.1

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