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EIF3G2 eukaryotic translation initiation factor 3G2 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830487, updated on 18-Sep-2024

Summary

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Official Symbol
EIF3G2
Official Full Name
eukaryotic translation initiation factor 3G2
Primary source
TAIR:AT5G06000
Locus tag
AT5G06000
See related
Araport:AT5G06000
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITIATION FACTOR 3G2; ATEIF3G2; eukaryotic translation initiation factor 3G2; K18J17.20; K18J17_20
Summary
One of the 2 genes that code for the G subunit of eukaryotic initiation factor 3 (EIF3).
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Genomic context

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See EIF3G2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_003076.8 (1808111..1809856)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene tRNA-Val Neighboring gene prenylated RAB acceptor 1.A2 Neighboring gene Mitochondrial glycoprotein family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene Plant self-incompatibility protein S1 family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Plant initiation factor 3 subunit composition resembles mammalian initiation factor 3 and has a novel subunit. Burks EA, et al. J Biol Chem, 2001 Jan 19. PMID 11042177
  2. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
  3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
  4. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_120682.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables translation initiation factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within translational initiation TAS
Traceable Author Statement
more info
  
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 3 complex ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
located_in nucleus ISM
Inferred from Sequence Model
more info
  
located_in plasma membrane HDA PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 3G2
NP_196219.3
  • eukaryotic translation initiation factor 3G2 (EIF3G2); FUNCTIONS IN: RNA binding, translation initiation factor activity; INVOLVED IN: translational initiation; LOCATED IN: eukaryotic translation initiation factor 3 complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Translation initiation factor 3, RNA-binding subunit (InterPro:IPR017334), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677), Zinc finger, CCHC-type (InterPro:IPR001878); BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3G1 (TAIR:AT3G11400.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    1808111..1809856
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120682.4 → NP_196219.3  eukaryotic translation initiation factor 3G2 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196219.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UQD0, A0A5S9Y1T0, Q9FI86
    Conserved Domains (3) summary
    COG0724
    Location:187 → 287
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12408
    Location:207 → 282
    RRM_eIF3G_like; RNA recognition motif in eukaryotic translation initiation factor 3 subunit G (eIF-3G) and similar proteins
    pfam12353
    Location:36 → 157
    eIF3g; Eukaryotic translation initiation factor 3 subunit G
Nucleotide Protein
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