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Mitochondrial glycoprotein family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830486, updated on 18-Sep-2024

Summary

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Official Full Name
Mitochondrial glycoprotein family protein
Primary source
TAIR:AT5G05990
Locus tag
AT5G05990
See related
Araport:AT5G05990
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
K18J17.19; K18J17_19
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Genomic context

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Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_003076.8 (1806761..1807919, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DHFS-FPGS homolog B Neighboring gene ncRNA Neighboring gene tRNA-Val Neighboring gene prenylated RAB acceptor 1.A2 Neighboring gene eukaryotic translation initiation factor 3G2 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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NM_120681.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Mitochondrial glycoprotein family protein
NP_196218.1
  • Mitochondrial glycoprotein family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial glycoprotein (InterPro:IPR003428); BEST Arabidopsis thaliana protein match is: Mitochondrial glycoprotein family protein (TAIR:AT3G55605.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    1806761..1807919 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120681.4 → NP_196218.1  Mitochondrial glycoprotein family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196218.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178U753, A0A5S9Y1T1, Q9FI87
    Conserved Domains (1) summary
    pfam02330
    Location:69 → 251
    MAM33; Mitochondrial glycoprotein
Nucleotide Protein
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