DHS deoxyhypusine synthase [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Symbol: DHS
Official Full Name: deoxyhypusine synthase
Primary source: TAIR:AT5G05920
Locus tag: AT5G05920
See related: Araport:AT5G05920
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: deoxyhypusine synthase; EDA22; embryo sac development arrest 22; K18J17.7; K18J17_7
Summary: Encodes a deoxyhypusine synthase.
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Genomic context

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See DHS in Genome Data Viewer

Location:: chromosome: 5

Exon count:: 7

Sequence:: Chromosome: 5; NC_003076.8 (1777547..1779867, complement)

Chromosome 5 - NC_003076.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

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Pathways from PubChem

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General gene information

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NM_001342839.1

Supported by ESTs:

NM_001342840.1

Supported by ESTs:

NM_120674.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables deoxyhypusine synthase activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within embryo sac development	IMP Inferred from Mutant Phenotype more info	PubMed

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: deoxyhypusine synthase

NP_001318486.1

deoxyhypusine synthase (DHS); INVOLVED IN: embryo sac development, peptidyl-lysine modification to hypusine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyhypusine synthase (InterPro:IPR002773); Has 2057 Blast hits to 2052 proteins in 494 species: Archae - 295; Bacteria - 232; Metazoa - 167; Fungi - 158; Plants - 157; Viruses - 0; Other Eukaryotes - 1048 (source: NCBI BLink).

NP_196211.1

deoxyhypusine synthase (DHS); INVOLVED IN: embryo sac development, peptidyl-lysine modification to hypusine; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Deoxyhypusine synthase (InterPro:IPR002773); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_003076.8 Reference assembly

Range

1777547..1779867 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_120674.4 → NP_196211.1 deoxyhypusine synthase [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_196211.1

Status: REVIEWED

UniProtKB/Swiss-Prot

Q9ASU5, Q9C5Y5, Q9FI94

UniProtKB/TrEMBL

A0A178U8Y5, A0A7G2FB90

Conserved Domains (1) summary

pfam01916
Location:42 → 353

DS; Deoxyhypusine synthase
NM_001342840.1 → NP_001330195.1 deoxyhypusine synthase [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A1P8BA27
NM_001342839.1 → NP_001318486.1 deoxyhypusine synthase [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

F4K292