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DNA repair REX1-B protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830373, updated on 18-Sep-2024

Summary

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Official Full Name
DNA repair REX1-B protein
Primary source
TAIR:AT5G04910
Locus tag
AT5G04910
See related
Araport:AT5G04910
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
MUG13.24; MUG13_24
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Genomic context

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Location:
chromosome: 5
Exon count:
4
Sequence:
Chromosome: 5; NC_003076.8 (1437563..1438978)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene DEA(D/H)-box RNA helicase family protein Neighboring gene NYC1-like protein Neighboring gene EAP30/Vps36 family protein Neighboring gene aminophospholipid ATPase 1 Neighboring gene Pol-like polyprotein/retrotransposon

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_120573.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
DNA repair REX1-B protein
NP_196111.2
  • unknown protein; Has 71 Blast hits to 71 proteins in 36 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    1437563..1438978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120573.4 → NP_196111.2  DNA repair REX1-B protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196111.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UGC8, A0MFD8, Q1PE01
    Conserved Domains (1) summary
    pfam14966
    Location:47 → 141
    DNA_repr_REX1B; DNA repair REX1-B
Nucleotide Protein
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