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ACA3 alpha carbonic anhydrase 3 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830296, updated on 18-Sep-2024

Summary

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Official Symbol
ACA3
Official Full Name
alpha carbonic anhydrase 3
Primary source
TAIR:AT5G04180
Locus tag
AT5G04180
See related
Araport:AT5G04180
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
alpha carbonic anhydrase 3; ALPHA CARBONIC ANHYDRASE 3; ATACA3; F21E1.100; F21E1_100
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Genomic context

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See ACA3 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
6
Sequence:
Chromosome: 5; NC_003076.8 (1147648..1149284, complement)

Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene glutamate synthase 1 Neighboring gene basic helix-loop-helix (bHLH) DNA-binding superfamily protein Neighboring gene Nucleotide-sugar transporter family protein Neighboring gene Calcium-binding EF-hand family protein Neighboring gene phytochrome kinase substrate 4 Neighboring gene metacaspase 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003076.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization and expression analysis of genes encoding alpha and beta carbonic anhydrases in Arabidopsis. Fabre N, et al. Plant Cell Environ, 2007 May. PMID 17407539
  2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_120500.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables carbonate dehydratase activity IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to carbon dioxide IEP
Inferred from Expression Pattern
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
alpha carbonic anhydrase 3
NP_196038.1
  • alpha carbonic anhydrase 3 (ACA3); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: response to carbon dioxide, one-carbon metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, alpha-class, catalytic domain (InterPro:IPR001148), Carbonic anhydrase, CAH1-like (InterPro:IPR018340); BEST Arabidopsis thaliana protein match is: alpha carbonic anhydrase 4 (TAIR:AT4G20990.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003076.8 Reference assembly

    Range
    1147648..1149284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120500.3 → NP_196038.1  alpha carbonic anhydrase 3 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_196038.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MFD7, Q9FYE3
    UniProtKB/TrEMBL
    A0A5S9Y1T6, A0A654FY87
    Conserved Domains (1) summary
    cd03124
    Location:35 → 257
    alpha_CA_prokaryotic_like; Carbonic anhydrase alpha, prokaryotic-like subfamily. Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9FYE3.1

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