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CTRG_01005 argininosuccinate synthase [ Candida tropicalis MYA-3404 ]

Gene ID: 8302191, updated on 18-Sep-2024

Summary

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Gene symbol
CTRG_01005
Gene description
argininosuccinate synthase
Locus tag
CTRG_01005
See related
FungiDB:CTRG_01005; VEuPathDB:CTRG_01005
Gene type
protein coding
RNA name
argininosuccinate synthase
RefSeq status
PROVISIONAL
Organism
Candida tropicalis MYA-3404 (strain: MYA-3404)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Candida
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Genomic context

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See CTRG_01005 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_003020038.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene acetyl-CoA carboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003020038.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of pathogenicity and sexual reproduction in eight Candida genomes. Butler G, et al. Nature, 2009 Jun 4. PMID 19465905, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables argininosuccinate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-arginine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in argininosuccinate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in urea cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
argininosuccinate synthase
XP_002546223.1
  • Candida DB at Institut Pasteur CTRG_01005

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003020038.1 Reference assembly

    Range
    2288493..2289743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002546177.1 → XP_002546223.1  argininosuccinate synthase [Candida tropicalis MYA-3404]

    See identical proteins and their annotated locations for XP_002546223.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5M4L5
    Conserved Domains (1) summary
    cd01999
    Location:6 → 399
    Argininosuccinate_Synthase; Argininosuccinate synthase. The Argininosuccinate synthase is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate . In ...
Protein Accession Links
GenPept Link UniProtKB Link
EER36265.1

Gene LinkOut

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Molecular Biology Databases
Research Materials