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TPPH Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830135, updated on 18-Sep-2024

Summary

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Official Symbol
TPPH
Official Full Name
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Primary source
TAIR:AT4G39770
Locus tag
AT4G39770
See related
Araport:AT4G39770
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T19P19.160; T19P19_160; trehalose-6-phosphate phosphatase H
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Genomic context

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See TPPH in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_003075.7 (18448865..18451305, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene bZIP transcription factor, putative (DUF630 and DUF632)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The redox-sensitive chloroplast trehalose-6-phosphate phosphatase AtTPPD regulates salt stress tolerance. Krasensky J, et al. Antioxid Redox Signal, 2014 Sep 20. PMID 24800789, Free PMC Article
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_001342553.1
NM_120140.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables trehalose-phosphatase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables trehalose-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in cytosol IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
NP_195687.2
  • Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G22190.1); Has 2411 Blast hits to 2406 proteins in 857 species: Archae - 41; Bacteria - 1356; Metazoa - 219; Fungi - 156; Plants - 489; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    18448865..18451305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120140.3 → NP_195687.2  Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195687.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    O65664, Q8GWG2
    UniProtKB/TrEMBL
    A0A178UZR4, A0A5S9Y0H5
    Conserved Domains (2) summary
    PLN02151
    Location:1 → 349
    PLN02151; trehalose-phosphatase
    COG1877
    Location:73 → 341
    OtsB; Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

  2. NM_001342553.1 → NP_001329289.1  Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UZR4, A0A1P8B7A9, A0A5S9Y0H5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8GWG2.1

Gene LinkOut

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