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RD19 Papain family cysteine protease [ Arabidopsis thaliana (thale cress) ]

Gene ID: 830064, updated on 18-Sep-2024

Summary

Official Symbol
RD19
Official Full Name
Papain family cysteine protease
Primary source
TAIR:AT4G39090
Locus tag
AT4G39090
See related
Araport:AT4G39090
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F19H22.190; F19H22_190; RD19A; RESPONSIVE TO DEHYDRATION 19; RESPONSIVE TO DEHYDRATION 19A
Summary
Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R#Aeimediated resistance response.
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Genomic context

See RD19 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (18215542..18217616, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene LOW protein: coatomer subunit alpha-1-like protein Neighboring gene B-box zinc finger family protein Neighboring gene vacuolar proton ATPase A3 Neighboring gene PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein Neighboring gene miscRNA

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General protein information

Preferred Names
Papain family cysteine protease
NP_568052.1
  • RESPONSIVE TO DEHYDRATION 19 (RD19); CONTAINS InterPro DOMAIN/s: Peptidase C1A, papain (InterPro:IPR013128), Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT2G21430.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    18215542..18217616 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_120069.5NP_568052.1  Papain family cysteine protease [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568052.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P43296, Q0WWF3, Q8H7C0, Q8LAT5
    UniProtKB/TrEMBL
    A0A178V006, A0A5S9Y0A9
    Conserved Domains (2) summary
    smart00848
    Location:51106
    Inhibitor_I29; Cathepsin propeptide inhibitor domain (I29)
    pfam00112
    Location:135359
    Peptidase_C1; Papain family cysteine protease