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glycosyl hydrolase family 10 protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829987, updated on 18-Sep-2024

Summary

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Official Full Name
glycosyl hydrolase family 10 protein
Primary source
TAIR:AT4G38300
Locus tag
AT4G38300
See related
Araport:AT4G38300
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22I13.70; F22I13_70
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (17944556..17945491, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene galacturonosyltransferase 3 Neighboring gene integral membrane hemolysin-III-like protein Neighboring gene hemolysin-III related integral membrane protein Neighboring gene miscRNA Neighboring gene Galactosyl transferase GMA12/MNN10 family protein Neighboring gene heptahelical protein 5 Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
glycosyl hydrolase family 10 protein
NP_195543.1
  • glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G38650.1); Has 1908 Blast hits to 1902 proteins in 430 species: Archae - 10; Bacteria - 1128; Metazoa - 20; Fungi - 351; Plants - 265; Viruses - 0; Other Eukaryotes - 134 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17944556..17945491 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119992.1 → NP_195543.1  glycosyl hydrolase family 10 protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195543.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FX37, Q9SVF5
    Conserved Domains (1) summary
    cl23725
    Location:75 → 261
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
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