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hemolysin-III related integral membrane protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829986, updated on 18-Sep-2024

Summary

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Official Full Name
hemolysin-III related integral membrane protein
Primary source
TAIR:AT4G38290
Locus tag
AT4G38290
See related
Araport:AT4G38290
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22I13.60; F22I13_60
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Genomic context

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Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (17942871..17944047)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene ncRNA Neighboring gene transport/golgi organization-like protein (DUF833) Neighboring gene galacturonosyltransferase 3 Neighboring gene integral membrane hemolysin-III-like protein Neighboring gene glycosyl hydrolase family 10 protein Neighboring gene miscRNA Neighboring gene Galactosyl transferase GMA12/MNN10 family protein Neighboring gene heptahelical protein 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_119991.2

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
hemolysin-III related integral membrane protein
NP_195542.1
  • Haemolysin-III related integral membrane protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 4 (TAIR:AT4G37680.2); Has 1144 Blast hits to 1144 proteins in 198 species: Archae - 0; Bacteria - 18; Metazoa - 607; Fungi - 265; Plants - 172; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17942871..17944047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119991.2 → NP_195542.1  hemolysin-III related integral membrane protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195542.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FWL6, A2RVJ5, Q9SVF6
    Conserved Domains (1) summary
    cl03831
    Location:42 → 93
    HlyIII; Haemolysin-III related
Nucleotide Protein
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