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transport/golgi organization-like protein (DUF833) [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829983, updated on 18-Sep-2024

Summary

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Official Full Name
transport/golgi organization-like protein (DUF833)
Primary source
TAIR:AT4G38260
Locus tag
AT4G38260
See related
Araport:AT4G38260
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F22I13.30; F22I13_30
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Genomic context

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Location:
chromosome: 4
Exon count:
5
Sequence:
Chromosome: 4; NC_003075.7 (17936921..17938270, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glycerol kinase Neighboring gene calcium-dependent protein kinase 26 Neighboring gene alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene ncRNA Neighboring gene galacturonosyltransferase 3 Neighboring gene integral membrane hemolysin-III-like protein Neighboring gene hemolysin-III related integral membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_119988.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
transport/golgi organization-like protein (DUF833)
NP_568038.1
  • Protein of unknown function (DUF833); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17936921..17938270 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119988.5 → NP_568038.1  transport/golgi organization-like protein (DUF833) [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568038.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V179, A0A7G2F6T1, F4JTM0
    Conserved Domains (1) summary
    pfam05742
    Location:1 → 256
    TANGO2; Transport and Golgi organisation 2
Nucleotide Protein
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