U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

XTH7 xyloglucan endotransglucosylase/hydrolase 7 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829936, updated on 18-Sep-2024

Summary

Official Symbol
XTH7
Official Full Name
xyloglucan endotransglucosylase/hydrolase 7
Primary source
TAIR:AT4G37800
Locus tag
AT4G37800
See related
Araport:AT4G37800
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
T28I19.80; T28I19_80; xyloglucan endotransglucosylase/hydrolase 7
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See XTH7 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Sequence:
Chromosome: 4; NC_003075.7 (17775370..17777445, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Homeobox-leucine zipper protein family Neighboring gene EPIDERMAL PATTERNING FACTOR-like protein Neighboring gene uncharacterized protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_119942.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 
enables polysaccharide binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables xyloglucan:xyloglucosyl transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in xyloglucan metabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular region ISM
Inferred from Sequence Model
more info
 

General protein information

Preferred Names
xyloglucan endotransglucosylase/hydrolase 7
NP_195494.1
  • xyloglucan endotransglucosylase/hydrolase 7 (XTH7); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 6 (TAIR:AT5G65730.1); Has 2144 Blast hits to 2126 proteins in 283 species: Archae - 0; Bacteria - 226; Metazoa - 0; Fungi - 448; Plants - 1383; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17775370..17777445 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119942.3NP_195494.1  xyloglucan endotransglucosylase/hydrolase 7 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195494.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8LER3, Q9T067
    UniProtKB/TrEMBL
    A0A178V2Q3, A0A5S9Y080
    Conserved Domains (1) summary
    cd02176
    Location:32289
    GH16_XET; Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16