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MYB87 myb domain protein 87 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829934, updated on 18-Sep-2024

Summary

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Official Symbol
MYB87
Official Full Name
myb domain protein 87
Primary source
TAIR:AT4G37780
Locus tag
AT4G37780
See related
Araport:AT4G37780
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
ATMYB87; myb domain protein 87; T28I19.60; T28I19_60
Summary
''encoded by the Myb-like transcription factor MYB87, regulates axillary meristem formation, expressed throughout the plant. Member of the R2R3 factor gene family.''
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Genomic context

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See MYB87 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Sequence:
Chromosome: 4; NC_003075.7 (17758232..17759746, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene squalene epoxidase 3 Neighboring gene 1-amino-cyclopropane-1-carboxylate synthase 8 Neighboring gene ncRNA Neighboring gene Homeobox-leucine zipper protein family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Chimeric repressor analysis identifies MYB87 as a possible regulator of morphogenesis via cell wall organization and remodeling in Arabidopsis. Fujiwara S, et al. Biotechnol Lett, 2014 May. PMID 24563287
  2. Different mechanisms participate in the R-dependent activity of the R2R3 MYB transcription factor C1. Hernandez JM, et al. J Biol Chem, 2004 Nov 12. PMID 15347654
  3. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
  4. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
  5. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_119940.5

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 
Process Evidence Code Pubs
involved_in plant-type cell wall organization IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
myb domain protein 87
NP_195492.2
  • myb domain protein 87 (MYB87); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Myb transcription factor (InterPro:IPR015495), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8573 Blast hits to 8093 proteins in 467 species: Archae - 0; Bacteria - 0; Metazoa - 622; Fungi - 441; Plants - 5850; Viruses - 3; Other Eukaryotes - 1657 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17758232..17759746 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119940.5 → NP_195492.2  myb domain protein 87 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195492.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A0MFC7, F4JSU0, O49806, Q7DLH1, Q9T066
    UniProtKB/TrEMBL
    A0A178V4J2, A0A5S9Y003
    Conserved Domains (1) summary
    cl28544
    Location:5 → 122
    SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
F4JSU0.1

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