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Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829920, updated on 18-Sep-2024

Summary

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Official Full Name
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
Primary source
TAIR:AT4G37660
Locus tag
AT4G37660
See related
Araport:AT4G37660
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F19F18.150; F19F18_150
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Genomic context

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Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_003075.7 (17695496..17696270)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene GRAS family transcription factor Neighboring gene ncRNA Neighboring gene N-acetyl-l-glutamate synthase 2 Neighboring gene ncRNA Neighboring gene heptahelical protein 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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NM_119929.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein
NP_195481.1
  • Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, intracellular, large ribosomal subunit; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L12, chloroplast (InterPro:IPR015608), Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (InterPro:IPR014719), Ribosomal protein L7/L12, C-terminal (InterPro:IPR013823); BEST Arabidopsis thaliana protein match is: Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like (TAIR:AT1G70190.2); Has 8368 Blast hits to 8368 proteins in 2737 species: Archae - 0; Bacteria - 5618; Metazoa - 193; Fungi - 132; Plants - 255; Viruses - 0; Other Eukaryotes - 2170 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17695496..17696270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119929.3 → NP_195481.1  Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195481.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y0E1, A0A7G2F6S5, Q9SZF8
    Conserved Domains (1) summary
    cd00387
    Location:40 → 166
    Ribosomal_L7_L12; Ribosomal protein L7/L12. Ribosomal protein L7/L12 refers to the large ribosomal subunit proteins L7 and L12, which are identical except that L7 is acetylated at the N terminus. It is a component of the L7/L12 stalk, which is located at the surface of ...
Nucleotide Protein
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