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Photosystem II manganese-stabilising protein (PsbO) family [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829877, updated on 18-Sep-2024

Summary

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Official Full Name
Photosystem II manganese-stabilising protein (PsbO) family
Primary source
TAIR:AT4G37230
Locus tag
AT4G37230
See related
Araport:AT4G37230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AP22.76; AP22_76
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Genomic context

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Location:
chromosome: 4
Exon count:
2
Sequence:
Chromosome: 4; NC_003075.7 (17516424..17517587)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene Cold acclimation protein WCOR413 family Neighboring gene ncRNA Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene HTH-type transcriptional regulator

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High light stimulates Deg1-dependent cleavage of the minor LHCII antenna proteins CP26 and CP29 and the PsbS protein in Arabidopsis thaliana. Zienkiewicz M, et al. Planta, 2012 Feb. PMID 21877139
  2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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NM_119886.1

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables oxygen evolving activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in photosystem II assembly IEA
Inferred from Electronic Annotation
more info
  
involved_in photosystem II stabilization IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  
part_of photosystem II oxygen evolving complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Photosystem II manganese-stabilising protein (PsbO) family
NP_195440.1
  • Photosystem II manganese-stabilising protein (PsbO) family; FUNCTIONS IN: calcium ion binding; INVOLVED IN: photosystem II stabilization, photosynthesis; LOCATED IN: oxygen evolving complex, extrinsic to membrane; CONTAINS InterPro DOMAIN/s: Photosystem II manganese-stabilising protein PsbO (InterPro:IPR002628); BEST Arabidopsis thaliana protein match is: PS II oxygen-evolving complex 1 (TAIR:AT5G66570.1); Has 429 Blast hits to 429 proteins in 136 species: Archae - 0; Bacteria - 140; Metazoa - 1; Fungi - 0; Plants - 159; Viruses - 0; Other Eukaryotes - 129 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17516424..17517587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119886.1 → NP_195440.1  Photosystem II manganese-stabilising protein (PsbO) family [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195440.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9SW65
    Conserved Domains (1) summary
    cl23911
    Location:1 → 142
    MSP; Manganese-stabilizing protein / photosystem II polypeptide
Nucleotide Protein
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