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PLP1 Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829861, updated on 18-Sep-2024

Summary

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Official Symbol
PLP1
Official Full Name
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
Primary source
TAIR:AT4G37070
Locus tag
AT4G37070
See related
Araport:AT4G37070
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AP22.83; AP22_83; AtPLAIVA; phospholipase A IVA; PLA IVA
Summary
Patatin-related phospholipase A. Expressed strongly and exclusively in roots. AtplaIVA-null mutants have reduced lateral root development. Phosphorylation by calcium-dependent protein kinases in vitro enhances its activity.
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Genomic context

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See PLP1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
7
Sequence:
Chromosome: 4; NC_003075.7 (17464594..17467186, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene methionine aminopeptidase 1D Neighboring gene PATATIN-like protein 4 Neighboring gene PATATIN-like protein 5 Neighboring gene ternary complex factor MIP1 leucine-zipper protein (Protein of unknown function, DUF547) Neighboring gene UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Roles of Arabidopsis patatin-related phospholipases a in root development are related to auxin responses and phosphate deficiency. Rietz S, et al. Mol Plant, 2010 May. PMID 20053799
  2. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
  3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

NM_001085037.2
NM_119870.2
NM_179180.3
NM_179181.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables monoacylglycerol lipase activity IDA
Inferred from Direct Assay
more info
 PubMed 
enables phospholipase activity IDA
Inferred from Direct Assay
more info
 PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within lateral root formation IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein
NP_001078506.1
  • PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 1996 Blast hits to 1989 proteins in 369 species: Archae - 0; Bacteria - 491; Metazoa - 206; Fungi - 135; Plants - 869; Viruses - 0; Other Eukaryotes - 295 (source: NCBI BLink).
NP_568015.1
  • PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
NP_849511.1
  • PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 2116 Blast hits to 2106 proteins in 385 species: Archae - 0; Bacteria - 498; Metazoa - 234; Fungi - 173; Plants - 892; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).
NP_849512.3
  • PLP1; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: PATATIN-like protein 5 (TAIR:AT4G37060.1); Has 2103 Blast hits to 2094 proteins in 385 species: Archae - 0; Bacteria - 498; Metazoa - 223; Fungi - 173; Plants - 890; Viruses - 0; Other Eukaryotes - 319 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17464594..17467186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_179180.3 → NP_849511.1  Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849511.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    F4JR94, O23148, O23179, Q8LBT5
    UniProtKB/TrEMBL
    A0A178UVZ8, A0A654FWB5
    Conserved Domains (1) summary
    cd07214
    Location:16 → 366
    Pat17_isozyme_like; Patatin-like phospholipase of plants

  2. NM_119870.2 → NP_568015.1  Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568015.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XZM2, A0A654FWB5
    Conserved Domains (1) summary
    cd07214
    Location:16 → 366
    Pat17_isozyme_like; Patatin-like phospholipase of plants

  3. NM_001085037.2 → NP_001078506.1  Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078506.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A654FWB5, A8MR01
    Conserved Domains (1) summary
    cd07214
    Location:16 → 355
    Pat17_isozyme_like; Patatin-like phospholipase of plants

  4. NM_179181.3 → NP_849512.3  Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_849512.3

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9XZM2, A0A654FWB5
    Conserved Domains (1) summary
    cd07214
    Location:16 → 366
    Pat17_isozyme_like; Patatin-like phospholipase of plants
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O23179.2

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