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PQ-loop repeat family protein / transmembrane family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829838, updated on 18-Sep-2024

Summary

Official Full Name
PQ-loop repeat family protein / transmembrane family protein
Primary source
TAIR:AT4G36850
Locus tag
AT4G36850
See related
Araport:AT4G36850
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AP22.27; AP22_27
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Genomic context

Location:
chromosome: 4
Exon count:
11
Sequence:
Chromosome: 4; NC_003075.7 (17353291..17356037, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene GNS1/SUR4 membrane protein family Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene LIM domain-containing protein Neighboring gene BEL1-like homeodomain 2

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

NM_001342421.1
NM_001342422.1
NM_001342423.1
NM_119849.6

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 

General protein information

Preferred Names
PQ-loop repeat family protein / transmembrane family protein
NP_568009.5
  • PQ-loop repeat family protein / transmembrane family protein; CONTAINS InterPro DOMAIN/s: Cystinosin/ERS1p repeat (InterPro:IPR006603); BEST Arabidopsis thaliana protein match is: PQ-loop repeat family protein / transmembrane family protein (TAIR:AT2G41050.1); Has 883 Blast hits to 635 proteins in 156 species: Archae - 0; Bacteria - 0; Metazoa - 204; Fungi - 499; Plants - 92; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17353291..17356037 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_119849.6NP_568009.5  PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_568009.5

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A5S9Y050, A0A654FW55, Q94AH7
    Conserved Domains (2) summary
    pfam04193
    Location:3387
    PQ-loop; PQ loop repeat
    cl01768
    Location:175291
    Phenol_MetA_deg; Putative MetA-pathway of phenol degradation
  2. NM_001342421.1NP_001329400.1  PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A1P8B7M8, C0Z2N7
  3. NM_001342423.1NP_001329401.1  PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UYY0, A0A1P8B7L3
  4. NM_001342422.1NP_001329399.1  PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178UYY0, A0A1P8B7L3