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Sec14p-like phosphatidylinositol transfer family protein [ Arabidopsis thaliana (thale cress) ]

Gene ID: 829816, updated on 18-Sep-2024

Summary

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Official Full Name
Sec14p-like phosphatidylinositol transfer family protein
Primary source
TAIR:AT4G36640
Locus tag
AT4G36640
See related
Araport:AT4G36640
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
AP22.47; AP22_47
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Genomic context

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Location:
chromosome: 4
Exon count:
6
Sequence:
Chromosome: 4; NC_003075.7 (17276882..17279428, complement)

Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Vacuolar sorting protein 39 Neighboring gene tRNA-Ile Neighboring gene ncRNA Neighboring gene plant-specific TFIIB-related protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003075.7

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

GeneRIFs: Gene References Into Functions

General gene information

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Homology

NM_001085032.2
NM_119827.4

Gene Ontology Provided by TAIR

Component Evidence Code Pubs
located_in cytoplasm ISM
Inferred from Sequence Model
more info
  
located_in nucleus ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
Sec14p-like phosphatidylinositol transfer family protein
NP_001078501.1
  • Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G75170.2); Has 1767 Blast hits to 1763 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 475; Fungi - 541; Plants - 540; Viruses - 0; Other Eukaryotes - 211 (source: NCBI BLink).
NP_195382.1
  • Sec14p-like phosphatidylinositol transfer family protein; FUNCTIONS IN: transporter activity; INVOLVED IN: transport; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Cellular retinaldehyde binding/alpha-tocopherol transport (InterPro:IPR001071), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: Sec14p-like phosphatidylinositol transfer family protein (TAIR:AT1G75170.2); Has 2667 Blast hits to 2660 proteins in 230 species: Archae - 0; Bacteria - 0; Metazoa - 843; Fungi - 695; Plants - 854; Viruses - 0; Other Eukaryotes - 275 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003075.7 Reference assembly

    Range
    17276882..17279428 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001342414.1 → NP_001329225.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V650, A0A384K8Z3, O23217, Q8GYD8
    Conserved Domains (2) summary
    smart00516
    Location:85 → 238
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
    smart01100
    Location:20 → 65
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain

  2. NM_001085032.2 → NP_001078501.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_001078501.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A8MQS3
    Conserved Domains (1) summary
    smart00516
    Location:25 → 178
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)

  3. NM_119827.4 → NP_195382.1  Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_195382.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A178V650, A0A384K8Z3, O23217, Q8GYD8
    Conserved Domains (2) summary
    smart00516
    Location:85 → 238
    SEC14; Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p)
    smart01100
    Location:20 → 65
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
Nucleotide Protein
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